Publications

This project will start on January 2021. Here the most relevant publications of each research group are listed.

2020

Fast-tracking of single emitters in large volumes with nanometer precision
Boris Louis, Rafael Camacho, Roger Bresolí-Obach, Sergey Abakumov, Johannes Vandaele, Tetsuhiro Kudo, Hiroshi Masuhara, Ivan Scheblykin, Johan Hofkens, and Susana Rocha
Published in Optics Express, September 2020 (see publication in Journal )


Developing Organoids from Ovarian Cancer as Experimental and Preclinical Models
Nina Maenhoudt, Charlotte Defraye, Matteo Boretto, Ziga Jan, Ruben Heremans, Bram Boeckx, Florian Hermans, Ingrid Arijs, Benoit Cox, Els Van Nieuwenhuysen, Ignace Vergote, Anne-Sophie Van Rompuy, Diether Lambrechts, Dirk Timmerman, Hugo Vankelecom
Published in Stem Cell Reports, April 2020 (see publication in Journal )


Structural characterization of fibrous synthetic hydrogels using fluorescence microscopy
Johannes Vandaele, Boris Louis, Kaizheng Liu, Rafael Camacho, Paul H. J. Kouwer, Susana Rocha
Published in Soft Matter, March 2020 (see publication in Journal or Research Gate )


Phenotyping of Rare CFTR Mutations Reveals Distinct Trafficking and Functional Defects
Marjolein Ensinck, Liesbeth De Keersmaecker, Lise Heylen, Anabela S. Ramalho, Rik Gijsbers, Ricard Farré, Kris De Boeck, Frauke Christ, Zeger Debyser, Marianne S. Carlon
Published in Cells, March 2020 (see publication in Journal or Research Gate )



2019

Allele specific repair of splicing mutations in cystic fibrosis through AsCas12a genome editing
Giulia Maule, Antonio Casini, Claudia Montagna, Anabela S. Ramalho, Kris De Boeck, Zeger Debyser, Marianne S. Carlon, Gianluca Petris, Anna Cereseto
Published in Nature Communications, August 2019 (see publication in Journal or Research Gate )


Patient-derived organoids from endometrial disease capture clinical heterogeneity and are amenable to drug screening
Matteo Boretto, Nina Maenhoudt, Xinlong Luo, Aurélie Hennes, Bram Boeckx, Bich Bui, Ruben Heremans, Lisa Perneel, Hiroto Kobayashi, Indra Van Zundert, Hilde Brems, Benoit Cox, Marc Ferrante, Hiroshi Uji-I, Kian Peng Koh, Thomas D’Hooghe, Arne Vanhie, Ignace Vergote, Christel Meuleman, Carla Tomassetti, Diether Lambrechts, Joris Vriens, Dirk Timmerman, Hugo Vankelecom
Published in Nature Cell Biology, August 2019 (see publication in Journal )


Polymeric Engineering of Nanoparticles for Highly Efficient Multifunctional Drug Delivery Systems
Beatrice Fortuni, Tomoko Inose, Monica Ricci, Yasuhiko Fujita, Indra Van Zundert, Akito Masuhara, Eduard Fron, Hideaki Mizuno, Loredana Latterini, Susana Rocha, Hiroshi Uji-i
Published in Scientific reports, February 2019 (see publication in Journal or Research Gate )



2018

Linking single-cell measurements of mass, growth rate, and gene expression
Robert J. Kimmerling, Sanjay M. Prakadan, Alejandro J. Gupta, Nicholas L. Calistri, Mark M. Stevens, Selim Olcum, Nathan Cermak, Riley S. Drake, Kristine Pelton, Frederik De Smet, Keith L. Ligon, Alex K. Shalek, Scott R. Manalis
Published in Genome Biology, November 2018 (see publication in Journal or Research Gate )



2017

Live-cell monochromatic dual-label sub-diffraction microscopy by mt-pcSOFI
Sam Duwe, Wim Vandenberg, Peter Dedecker
Published in Chemical Communications, May 2017 (see publication in Journal )


Development of organoids from mouse and human endometrium showing endometrial epithelium physiology and long-term expandability
Matteo Boretto, Benoit Cox, Manuel Noben, Nikolai Hendriks, Amelie Fassbender, Heleen Roose, Frédéric Amant, Dirk Timmerman, Carla Tomassetti, Arne Vanhie, Christel Meuleman, Marc Ferrante, Hugo Vankelecom
Published in Development, May 2017 (see publication in Journal )


Genetically encoded biosensors for visualizing live-cell biochemical activity at super-resolution
Gary C H Mo, Brian Ross, Fabian Hertel, Premashis Manna, Xinxing Yang, Eric Greenwald, Chris Booth, Ashlee M Plummer, Brian Tenner, Zan Chen, Yuxiao Wang, Eileen J Kennedy, Philip A Cole, Karen G Fleming, Amy Palmer, Ralph Jimenez, Jie Xiao, Peter Dedecker, Jin Zhang
Published in Nature Methods, March 2017 (see publication in Journal )



2016

Linking single-cell measurements of mass, growth rate, and gene expression
Frederik De Smet, Mirian Saiz Rubio, Daphne Hompes, Evelyne Naus, Greet De Baets, Tobias Langenberg, Mark S Hipp, Bert Houben, Filip Claes, Sarah Charbonneau, Javier Delgado Blanco, Stephane Plaisance, Shakti Ramkissoon, Lori Ramkissoon, Colinda Simons, Piet van den Brandt, Matty Weijenberg, Manon Van England, Sandrina Lambrechts, Frederic Amant, André D Hoore, Keith L Ligon, Xavier Sagaert, Joost Schymkowitz, Frederic Rousseau
Published in Journal of Pathology, December 2016 (see publication in Journal )


De novo design of a biologically active amyloid
Rodrigo Gallardo, Meine Ramakers, Frederik De Smet, Filip Claes, Ladan Khodaparast, Laleh Khodaparast, José R. Couceiro, Tobias Langenberg, Maxime Siemons, Sofie Nyström, Laurence J. Young, Romain F. Laine, Lydia Young, Enrico Radaelli, Iryna Benilova, Manoj Kumar, An Staes, Matyas Desager, Manu Beerens, Petra Vandervoort, Aernout Luttun, Kris Gevaert, Guy Bormans, Mieke Dewerchin, Johan Van Eldere, Peter Carmeliet, Greetje Vande Velde, Catherine Verfaillie, Clemens F. Kaminski, Bart De Strooper, Per Hammarström, K. Peter R. Nilsson, Louise Serpell, Joost Schymkowitz, Frederic Rousseau
Published in Science, November 2016 (see publication in Journal )



2015

ArAAV-CFTRΔR Rescues the Cystic Fibrosis Phenotype in Human Intestinal Organoids and Cystic Fibrosis Mice
Dragana Vidović, Marianne S. Carlon, Mélanie F. da Cunha, Johanna F. Dekkers, Monika I. Hollenhorst, Marcel J. C. Bijvelds, Anabela S. Ramalho, Chris Van den Haute, Marc Ferrante, Veerle Baekelandt, Hettie M. Janssens, Kris De Boeck, Isabelle Sermet-Gaudelus, Hugo R. de Jonge, Rik Gijsbers, Jeffrey M. Beekman, Aleksander Edelman, Zeger Debyser
Published in American Journal of Respiratory and Critical Care Medicine, September 2015 (see publication in Journal or Research Gate )


Expression-Enhanced Fluorescent Proteins Based on Enhanced Green Fluorescent Protein for Super-resolution Microscopy
Sam Duwé, Elke De Zitter, Vincent Gielen, Benjamien Moeyaert, Wim Vandenberg, Tim Grotjohann, Koen Clays, Stefan Jakobs, Luc Van Meervelt, Peter Dedecker
Published in Nature Methods, August 2015 (see publication in Journal )